Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918824.1_cds_XP_016468174.1_60842
CDS Infomation

[gene=LOC107790731] [db_xref=GeneID:107790731] [protein=phosphatidylinositol/phosphatidylcholine transfer protein SFH3-like] [protein_id=XP_016468174.1] [location=complement(join(22500..22526,22627..22719,22800..22899,22990..23039,23257..23358,23485..23562,23660..23926,24642..24741,25208..25505,27055..27061))] [gbkey=CDS]
Sequence

ATGTCAGATATTGGTGAAGGATCTTCATTTGATGATGAAAATTATGAAGATCAATTACAT
TCTAAAATCTGCGAGGGAAGGAAGAATGAACTTGGGATCCTTAAGACAGAAGAGAAAAAG
CTGCCCAGTGATTCTGGGAATTCCCTTGAGAAGATAATCAGGAAACAAAATGATATTGAA
ATTTCTTTTATCAAAGAGCAAATTTGGGGCACTGAGGAGTTGAAGTTTGTTAATGCTTTT
CGACAAGTGCTGATTAAGGAGAACCTGCTTCCTGCTATGCATGATGATAATCTCAAATTA
TTAAGATTTCTGAAAGCTAGAAAGTTTGACATTGAGAAGGCAAAGTGCATGTGGACAAAT
ATGCTTCAGTGGAGGAGAGATTTTGGAACTGACACTATAATCAAGGATTTTGACTTCCAT
GAAAGGGATAAAGTTCTGCAAAACTACCCTCAGGGTTATCATGGCACAGATAAGGAAGGA
AGACCAGTTTATATCGAAAGATTGGGGCTAATAAATGTGGAAAAACTTTTGGAAGTGACT
ACTTTGGATCGATATGTTAAATATCATGTTCAAGAGTTTGAGAAGTCTACTGCCTTCAGG
TTTCCTGCCTGCTCTGTAGCTGCAAAAAGACACATAGATAGAAGTGTTACCATTTTGGAT
GTCGAAGGAGTGAGTTTAAGGAATTTCTCAAAACCTGTACGAGAAGTCATTTTGCGGCTG
CAGAAGATTGATAATGACTTTTACCCTGAAACACTTGGAGAAATGTTTGTCATAAACGCC
GGACCTGGATTTAGGCTCATTTGGAATATACTCAAGCCTTTTCTTGACCCTGAAACGACG
TCCAAGATTCATGTTCTTGGCAACAATTATAAAGGCAAACTGCTCGAAATCATCGATCAA
CGTGAGTTGCCAGATTTTCTAGGTGGCAGTTGCACGTGTGGGAATGATGGTGGTTGTTTA
AGGTCAGATAAAGGGCCATGGAGAAAACTCAAGATATCACTGATGAACTGTGGAGAGGAA
TCAGAATGTTTAGAGAAGACAATAGCAACACCGGATGCTACAAGGCAACTAGTAGGAGAG
AACCAGCCAGAGATGGTAAGGTGTTGTGACATATGCTACTGA

Peptide Sequence

PEP ID

XP_016468174.1
PEP Infomation

PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH3-like [Nicotiana tabacum]
Sequence

MSDIGEGSSFDDENYEDQLHSKICEGRKNELGILKTEEKKLPSDSGNSLEKIIRKQNDIE
ISFIKEQIWGTEELKFVNAFRQVLIKENLLPAMHDDNLKLLRFLKARKFDIEKAKCMWTN
MLQWRRDFGTDTIIKDFDFHERDKVLQNYPQGYHGTDKEGRPVYIERLGLINVEKLLEVT
TLDRYVKYHVQEFEKSTAFRFPACSVAAKRHIDRSVTILDVEGVSLRNFSKPVREVILRL
QKIDNDFYPETLGEMFVINAGPGFRLIWNILKPFLDPETTSKIHVLGNNYKGKLLEIIDQ
RELPDFLGGSCTCGNDGGCLRSDKGPWRKLKISLMNCGEESECLEKTIATPDATRQLVGE
NQPEMVRCCDICY

Transcript Sequence

Gene sequence data has not been registered.